bmtk.simulator.popnet package¶
Subpackages¶
Submodules¶
bmtk.simulator.popnet.config module¶
bmtk.simulator.popnet.popedge module¶
bmtk.simulator.popnet.popnetwork module¶
bmtk.simulator.popnet.popnetwork_OLD module¶
bmtk.simulator.popnet.popnode module¶
bmtk.simulator.popnet.popsimulator module¶
bmtk.simulator.popnet.sonata_adaptors module¶
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class
bmtk.simulator.popnet.sonata_adaptors.
PopEdgeAdaptor
(network)[source]¶ Bases:
bmtk.simulator.core.sonata_reader.edge_adaptor.EdgeAdaptor
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class
bmtk.simulator.popnet.sonata_adaptors.
PopNetEdge
(sonata_edge, edge_adaptor)[source]¶ Bases:
bmtk.simulator.core.sonata_reader.edge_adaptor.SonataBaseEdge
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property
syn_weight
¶
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property
bmtk.simulator.popnet.utils module¶
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bmtk.simulator.popnet.utils.
assert_model_known
(model, model_dict)[source]¶ Test if a model in in the model_dict; if not, raise UnknownModelError
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bmtk.simulator.popnet.utils.
create_instance
(data_dict)[source]¶ Helper function to create an object from a dictionary containing:
“module”: The name of the module containing the class “class”: The name of the class to be used to create the object
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bmtk.simulator.popnet.utils.
create_population_list
(node_table, model_table)[source]¶ Create a population list from the node and model pandas tables
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bmtk.simulator.popnet.utils.
df_to_csv
(df, save_file_name, index=False, sep=' ', na_rep='None')[source]¶
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bmtk.simulator.popnet.utils.
get_firing_rate_from_nwb
(populations, nwb_file, trial)[source]¶ Calculates firing rates for an external population